The detailed information of tRNA gene sequence


Sequence ID>WENV170766825
Genome IDLWDU01043029
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 16105
End posion on genome 16196
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaatcaaaa
tRNA gene sequence 
GGAAGGGTGGCTGAGCTTGGTTTAAGGCGCTTGATTCGAAATCAAGTGTAGGGGCAACTC
TACCGTGGGTTCAAATCCCACCCCTTCCGCCA
Downstream region at tRNA end position 
tttttataga
Secondary structure (Cloverleaf model)
>WENV170766825	Ser	CGA
                   a      GCCA tttttataga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     A
  T         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    T T T A        G     TGTAGGGGCAACTCTACC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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