The detailed information of tRNA gene sequence


Sequence ID>WENV170766833
Genome IDLWDU01043030
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 190522
End posion on genome 190598
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagccccatg
tRNA gene sequence 
GGAGTGGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCACTCCGCCA
Downstream region at tRNA end position 
tcgtaaaaaa
Secondary structure (Cloverleaf model)
>WENV170766833	Asp	GTC
                   g      GCCA tcgtaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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