The detailed information of tRNA gene sequence


Sequence ID>WENV170766873
Genome IDLWDU01043119
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 15656
End posion on genome 15581
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attattgaat
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGACGGTCTCCAAAACCGTAGGTCGAGGGTTCAAAT
CCTTCTGCCCCTGCCA
Downstream region at tRNA end position 
accgaatgtg
Secondary structure (Cloverleaf model)
>WENV170766873	Trp	CCA
                   t      GCCA accgaatgtg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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