The detailed information of tRNA gene sequence


Sequence ID>WENV170766876
Genome IDLWDU01043129
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 9128
End posion on genome 9223
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaccagttaT
tRNA gene sequence 
GGAGGGGAAGCAGTCCCGGTGGGCTGGCCGGTCTTCAAAACCGGTGAAGGACGTCAGACG
TTCTTAGTGGGTTCGACTCCCACTCTCTTCCGCC
Downstream region at tRNA end position 
Aattgaaatt
Secondary structure (Cloverleaf model)
>WENV170766876	SeC(p)	TCA
                   T      CGCC Aattgaaatt
                     G - C
                     G + T
                     A - T
                     G - C
                     G + T
                     G - C
                     G + T          T C
                    A     C A C C C     A
    C C C T        A      | | | | |     G
  G         G A C G       G T G G G     C
  G         +   | |                 T T
  T         T G G C
    G G G C        C     AAGGACGTCAGACGTTCTTA
                    G   G
                    G + T
                    T + G
                    C - G
                    T   C
                  T       C
                  C       A
                    A A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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