The detailed information of tRNA gene sequence


Sequence ID>WENV170766877
Genome IDLWDU01043132
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 12024
End posion on genome 12114
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcattaaat
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGCGTGTATGCGTTCATAGCGT
ATCGAGGGTTCGAATCCCTTCCCCTCTTCCA
Downstream region at tRNA end position 
ccttttctag
Secondary structure (Cloverleaf model)
>WENV170766877	Ser	GGA
                   t      TCCA ccttttctag
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATGCGTTCATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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