The detailed information of tRNA gene sequence


Sequence ID>WENV170766879
Genome IDLWDU01043152
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 11980
End posion on genome 12056
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacacattgt
tRNA gene sequence 
GGCGGAGTAGCTCAGCTGGTTAGAGCAGCGGAATCATAATCCGCGTGTCGGGAGTTCAAG
TCTCTCCTCCGCTACCA
Downstream region at tRNA end position 
tttttctctt
Secondary structure (Cloverleaf model)
>WENV170766879	Met	CAT
                   t      ACCA tttttctctt
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C T C T C     A
      C G A        A      | + | | |     A
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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