The detailed information of tRNA gene sequence


Sequence ID>WENV170766894
Genome IDLWDU01043252
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 332
End posion on genome 242
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaatagaat
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTTAAGGCGCACGCCTGCTAAGTGTGTGTGGGTTTACTCCC
ACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ccccttagca
Secondary structure (Cloverleaf model)
>WENV170766894	Ser	GCT
                   t      GCCA ccccttagca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          G     TGTGGGTTTACTCCCACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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