The detailed information of tRNA gene sequence


Sequence ID>WENV170766922
Genome IDLWDU01043522
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 8246
End posion on genome 8335
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cacccaattt
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTTAAGGCGGCACCCTGCTAAGGTGTTTTAGGTGAAATATCC
TAACGTGGGTTCGAATCCCACCCCCTCCGCat
Downstream region at tRNA end position 
aaataaaaga
Secondary structure (Cloverleaf model)
>WENV170766922	Ser	GCT
                   t      GCat aaataaaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TTTAGGTGAAATATCCTAAC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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