The detailed information of tRNA gene sequence


Sequence ID>WENV170766941
Genome IDLWDU01043657
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 13448
End posion on genome 13361
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacgaggatt
tRNA gene sequence 
GGAGGGATGGCCGAGTGGTTTATGGCGCACGCTTGGAAAGCGTGTTTACGGAAACGTATC
CAGGGTTCGAATCCCTGTCTCTCCGCAA
Downstream region at tRNA end position 
ggttgttcta
Secondary structure (Cloverleaf model)
>WENV170766941	Ser	GGA
                   t      GCAA ggttgttcta
                     G - C
                     G - C
                     A - T
                     G - C
                     G + T
                     G - C
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G       + | | |                 T T
    T       T G G C
      T T A        G     TTTACGGAAACGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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