The detailed information of tRNA gene sequence


Sequence ID>WENV170766963
Genome IDLWDU01043767
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 57454
End posion on genome 57367
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cctgggttta
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCACTCGCCTGCTAAGCGAGTATGGGTTGATGCCCA
TCGAGGGTTCGAATCCCTCCCTCTCCGCtg
Downstream region at tRNA end position 
gaaaggatat
Secondary structure (Cloverleaf model)
>WENV170766963	Ser	GCT
                   a      GCtg gaaaggatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     TATGGGTTGATGCCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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