The detailed information of tRNA gene sequence


Sequence ID>WENV170766981
Genome IDLWDU01043774
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 26531
End posion on genome 26607
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgaatattt
tRNA gene sequence 
GGGCCTCTAGCTCAATCGGTTAGAGCAACGGTCTCATAAACCGTAGGTTCTGGGTTCAAT
CCCCAGGGGGCCCACCA
Downstream region at tRNA end position 
aaaggagagg
Secondary structure (Cloverleaf model)
>WENV170766981	Met	CAT
                   t      ACCA aaaggagagg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G          C T
                    T     G A C C C     A
      T A A        A      | | | | |     A
    C       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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