The detailed information of tRNA gene sequence


Sequence ID>WENV170767007
Genome IDLWDU01043799
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 8213
End posion on genome 8137
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctcatttttt
tRNA gene sequence 
CGGGGTATAGCGCAGCCTGGCAGCGCATTTGCTTTGGGAGCAAAGGGTCGTTGGTTCAAA
TCCAGCTACCCCGACCA
Downstream region at tRNA end position 
ttttaggaaa
Secondary structure (Cloverleaf model)
>WENV170767007	Pro	TGG
                   t      ACCA ttttaggaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G A C C     A
      C G A        A      | + | | |     A
    C       C G C G       G T T G G     C
    T       | | | |                 T T
    G       G C G C
      G C A        A     GGGTC
                    T - A
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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