The detailed information of tRNA gene sequence


Sequence ID>WENV170767020
Genome IDLWDU01043817
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 13973
End posion on genome 14060
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttataaacac
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGACGAAGGCACTGGTCTTGAAAACCAGCGTAGGGCAACCTACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
catttgtttt
Secondary structure (Cloverleaf model)
>WENV170767020	Ser	TGA
                   c      GCCA catttgtttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    A       A G G C
      C G A        A     CGTAGGGCAACCTACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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