The detailed information of tRNA gene sequence


Sequence ID>WENV170767031
Genome IDLWDU01043871
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 705
End posion on genome 782
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaacattac
tRNA gene sequence 
AGGGTTGTAGCTCAATCAGGTTAGAGCATCGCTCTCATAAAGCGCAGGTTCTCGGTTCAA
ATCCGAGCAGCCCTACCA
Downstream region at tRNA end position 
ctttaaagga
Secondary structure (Cloverleaf model)
>WENV170767031	Met	CAT
                   c      ACCA ctttaaagga
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G
                     T - A
                     G - C          T A
                    T     G A G C C     A
    C T A A        A      | | | | |     A
  A         C T C G       C T C G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          A     AGGTT
                    T   C
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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