The detailed information of tRNA gene sequence


Sequence ID>WENV170767078
Genome IDLWDU01044286
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 15941
End posion on genome 15852
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tctgattata
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGTTGAAAGCGCTCCCCTGCTAAGGGAGTAAGGACTAAAATCCT
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtaaaaaatg
Secondary structure (Cloverleaf model)
>WENV170767078	Ser	GCT
                   a      GCCA gtaaaaaatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TAAGGACTAAAATCCTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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