The detailed information of tRNA gene sequence


Sequence ID>WENV170767084
Genome IDLWDU01044300
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 10998
End posion on genome 10923
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attattgagt
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCGGTGGTCTCCAAAACCACAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
gcttaagctt
Secondary structure (Cloverleaf model)
>WENV170767084	Trp	CCA
                   t      GCCA gcttaagctt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    G - C
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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