The detailed information of tRNA gene sequence


Sequence ID>WENV170767099
Genome IDLWDU01044388
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 4818
End posion on genome 4729
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attaataatt
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATCGCGCACGCTTGGAAAGTGTGTAAGGTGTCAAAGCCT
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
tataagtctt
Secondary structure (Cloverleaf model)
>WENV170767099	Ser	GGA
                   t      GCCA tataagtctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TAAGGTGTCAAAGCCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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