The detailed information of tRNA gene sequence


Sequence ID>WENV170767111
Genome IDLWDU01044402
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 18577
End posion on genome 18653
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagttttata
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCAGTGGACTCATAATCCATTGGTCGGAGGTTCGAG
TCCTCCCGGGCCCACCA
Downstream region at tRNA end position 
gattcttaat
Secondary structure (Cloverleaf model)
>WENV170767111	Met	CAT
                   a      ACCA gattcttaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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