The detailed information of tRNA gene sequence


Sequence ID>WENV170767129
Genome IDLWDU01044545
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 1482
End posion on genome 1398
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttatttagtt
tRNA gene sequence 
GCCCGGGTGGCGGAATTGGTAGACGCGCTAGGTTCAGGGTCTAGTGTCCTTTAGGATGTG
CTGGTTCGACTCCAGTCCCGGGCACac
Downstream region at tRNA end position 
actaactcca
Secondary structure (Cloverleaf model)
>WENV170767129	Leu	CAG
                   t      ACac actaactcca
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T C
                    T     T G A C C     A
      T A A        G      + | | | |     G
    T       G G C G       G C T G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCCTTTAGGATGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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