The detailed information of tRNA gene sequence


Sequence ID>WENV170767157
Genome IDLWDU01044649
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 6088
End posion on genome 6014
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaactaattt
tRNA gene sequence 
GGCGTCGTACCCAAGTGGTCTAAGGGAGCAGTTTGCAAAACTGTCATTCATCGGTTCGAA
TCCGATCGACGCCTCgt
Downstream region at tRNA end position 
tgatgcccgg
Secondary structure (Cloverleaf model)
>WENV170767157	Cys	GCA
                   t      TCgt tgatgcccgg
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     T A G C C     A
      T G A        A      | | | | |     G
    G       A C C C       A T C G G     C
    G         | | |                 T T
    T       A G G G
      C T A        A     CATTC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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