The detailed information of tRNA gene sequence


Sequence ID>WENV170767173
Genome IDLWDU01044679
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 127681
End posion on genome 127767
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attaattatt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTTAAGGCGCACGCTTGGAAAGTGTGTAAGGTTAATAGCTTT
CGCAGGTTCGAATCCTGTTCTCTCCACat
Downstream region at tRNA end position 
cagttttatc
Secondary structure (Cloverleaf model)
>WENV170767173	Ser	GGA
                   t      ACat cagttttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TAAGGTTAATAGCTTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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