The detailed information of tRNA gene sequence


Sequence ID>WENV170767195
Genome IDLWDU01044719
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 11336
End posion on genome 11421
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctgagatata
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCGCACGCTTGGAAAGCGTGTGTAGGCAACCCCTAC
CGAGGGTTCGAATCCCTCCCTCTCCGttt
Downstream region at tRNA end position 
aaagttgata
Secondary structure (Cloverleaf model)
>WENV170767195	Ser	GGA
                   a      Gttt aaagttgata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TGTAGGCAACCCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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