The detailed information of tRNA gene sequence


Sequence ID>WENV170767207
Genome IDLWDU01044812
Search identical group
Phylum/Class[LWDU] hydrothermal vent metagenome; deep sea hydrothermal plume seawater
Species
Start position on genome 6113
End posion on genome 6204
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taacagatct
tRNA gene sequence 
GGAGAGGTGGCCGAGTTGGCTTAAGGCGCACGCCTGCTAAGTGTGTGTAGGCTTAACCCC
TACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tctaatttaa
Secondary structure (Cloverleaf model)
>WENV170767207	Ser	GCT
                   t      GCCA tctaatttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T T A          G     TGTAGGCTTAACCCCTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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