The detailed information of tRNA gene sequence


Sequence ID>WENV170776424
Genome IDLXOW01165003
Search identical group
Phylum/Class[LXOW] bovine gut metagenome; Cow rumen
Species
Start position on genome 12590
End posion on genome 12515
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
ttttccatat
tRNA gene sequence
GGCCTTGAAGCCCAAATGGAAGGGTGCCGGACTGTCTCCCCGGTTGTTGCGGGTTCGAGT
CCCGTCAAGGTCGCCA
Downstream region at tRNA end position
gacgcttcct
Secondary structure (Cloverleaf model)
>WENV170776424	Asp	GTC
                   t      GCCA gacgcttcct
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     T - A
                     G - C          T G
                    A     T G C C C     A
      A A A        A      + | | | |     G
    T       C C C G       G C G G G     C
    G       | | | +                 T T
    G       G G G T
      A A          G     TTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A   C
                  C       C
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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