The detailed information of tRNA gene sequence


Sequence ID>WENV170777170
Genome IDLXOW01253995
Search identical group
Phylum/Class[LXOW] bovine gut metagenome; Cow rumen
Species
Start position on genome 860
End posion on genome 955
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcgtgagcat
tRNA gene sequence 
GCGGGTGTAGTGTAGTGGCAGCACGCAAGACTTCAGATCTTGATTCGGCGTACCTCCAGT
GCGCAGGCGCGGGTTCGATTCCCGTCACCCGCTCAA
Downstream region at tRNA end position 
gtaaaatgcg
Secondary structure (Cloverleaf model)
>WENV170777170	SeC	TCA
                   t      TCAA gtaaaatgcg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T G C C C     A
        G A        A      + | | | |     G
      T     T G T G       G C G G G     C
      G     + | | |                 T T
      G     G C A C
        C A        G     ATTCGGCGTACCTCCAGTGCGCAGGC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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