The detailed information of tRNA gene sequence


Sequence ID>WENV170777224
Genome IDLXOW01259406
Search identical group
Phylum/Class[LXOW] bovine gut metagenome; Cow rumen
Species
Start position on genome 1262
End posion on genome 1352
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgggcgacgc
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGCCTATCGGGCACGCCTGGAGAGCGTGAGTGCTCCAAAAGGGC
ACCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tttttgtgcc
Secondary structure (Cloverleaf model)
>WENV170777224	Ser	GGA
                   c      GCCA tttttgtgcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G A C C       G T G G G     C
    G       +   | |                 T T
    C       T C G G
      C T A        G     AGTGCTCCAAAAGGGCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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