The detailed information of tRNA gene sequence


Sequence ID>WENV170777439
Genome IDLXOW01283722
Search identical group
Phylum/Class[LXOW] bovine gut metagenome; Cow rumen
Species
Start position on genome 48456
End posion on genome 48363
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
actaaaatat
tRNA gene sequence 
GGCGAGGTGGTAGAGCTGGATGATTACAACGGTCTTGAAAACCGTCGGTGGCAGTGGCCC
TGTCATCCGTGGGTTCGAATCCCACCCTCGCTTCtt
Downstream region at tRNA end position 
gaaatttggt
Secondary structure (Cloverleaf model)
>WENV170777439	Ser	TGA
                   t      TCtt gaaatttggt
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T C G A        G      | | | | |     G
  G         G A T G       G T G G G     C
  G         + | | |                 T T
  A         T T A C
    T G A          A     CGGTGGCAGTGGCCCTGTCATCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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