The detailed information of tRNA gene sequence


Sequence ID>WENV170777615
Genome IDLXOW01305137
Search identical group
Phylum/Class[LXOW] bovine gut metagenome; Cow rumen
Species
Start position on genome 60727
End posion on genome 60816
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcaaaagtT
tRNA gene sequence 
GGAAAGGTGGCTGAGTTGGTCTAAGGCACACGCCTGGAGAGCGTGAGAGGGGGCAACTCC
TCCGCGGGTTCGAATCCCGCCCTTTCCGAtg
Downstream region at tRNA end position 
ttgcgctaga
Secondary structure (Cloverleaf model)
>WENV170777615	Ser	GGA
                   T      GAtg ttgcgctaga
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        G      | | | | |     G
  G         G T C G       G C G G G     C
  G           + | |                 T T
  T         A G G C
    C T A          A     AGAGGGGGCAACTCCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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