The detailed information of tRNA gene sequence


Sequence ID>WENV170778661
Genome IDLXOW01423971
Search identical group
Phylum/Class[LXOW] bovine gut metagenome; Cow rumen
Species
Start position on genome 1092
End posion on genome 1182
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccaattttg
tRNA gene sequence 
GGAGAGATGCTCGAGTGGCTTAAGAGGCACGCCTGGAAAGCGTGTATACGCCAAAAGCGT
ATCTCGGGTTCGAATCCCGATCTCTCCGCAA
Downstream region at tRNA end position 
gacaaggcaa
Secondary structure (Cloverleaf model)
>WENV170778661	Ser	GGA
                   g      GCAA gacaaggcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A G C C C     A
      T G A        G      | | | | |     G
    G       G C T C       T C G G G     C
    G         | | |                 T T
    C       A G A G
      T T A        G     TATACGCCAAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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