The detailed information of tRNA gene sequence


Sequence ID>WENV170779291
Genome IDLZQN01000203
Search identical group
Phylum/Class[LZQN] oil field metagenome; sample BH-FW-7 from oil reservoir
Species
Start position on genome 5539
End posion on genome 5621
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtgacctaaa
tRNA gene sequence 
GCCGGGGTTGCCGAGCGGTAAGGCGCACGCCTGGAGAGCGTGTGGGCGTTCGCCCGCGTG
GGTTCGAATCCCACCCCCGGCGCtc
Downstream region at tRNA end position 
tgaaaattcg
Secondary structure (Cloverleaf model)
>WENV170779291	Ser	GGA
                   a      GCtc tgaaaattcg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
        G A        T      | | | | |     G
      C     G C C G       G T G G G     C
      G       | | |                 T T
      G     A G G C
        T A        G     TGGGCGTTCGCCCGC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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