The detailed information of tRNA gene sequence


Sequence ID>WENV170779575
Genome IDLZQQ01000021
Search identical group
Phylum/Class[LZQQ] oil field metagenome; sample BH-FW-20 from oil reservoir
Species
Start position on genome 25495
End posion on genome 25406
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcgcgccgct
tRNA gene sequence 
GGAGAGATGCCGGAGTGGCCGAACGGGACGGATTCGAAATCCGTTGTACGGGCAACCGTA
CCTAGGGTTCAAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
ttatcgaaac
Secondary structure (Cloverleaf model)
>WENV170779575	Ser	CGA
                   t      GCCA ttatcgaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G G C C       T A G G G     C
    G         | | |                 T T
    C       A C G G
      C G A        G     TGTACGGGCAACCGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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