The detailed information of tRNA gene sequence


Sequence ID>WENV170780483
Genome IDMAAB01001646
Search identical group
Phylum/Class[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
Species
Start position on genome 2543
End posion on genome 2459
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
actaattttt
tRNA gene sequence 
GCAGAGGTCGCTTAGCCTGGTAGAGCGCGGGCCTTGAGAGCCTGTGTGTGCAAGCACGCG
GGGGTTCGAATCCCTCTCTCTGCGCtt
Downstream region at tRNA end position 
gttatttccc
Secondary structure (Cloverleaf model)
>WENV170780483	Ser	TGA
                   t      GCtt gttatttccc
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      | + | | |     G
    C       T T C G       G G G G G     C
    T       + | | |                 T T
    G       G A G C
      G T A        G     TGTGTGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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