The detailed information of tRNA gene sequence


Sequence ID>WENV170780597
Genome IDMAAB01007674
Search identical group
Phylum/Class[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
Species
Start position on genome 12225
End posion on genome 12140
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
attgtccgat
tRNA gene sequence 
GCCCGGGTGGTGGAATTGGTAGACACAAGGGATTTAAAATCCCTCGCTCATAGAGCGTGA
CGGTTCAAGTCCGTCTCCGGGTACCA
Downstream region at tRNA end position 
ccttttggac
Secondary structure (Cloverleaf model)
>WENV170780597	Leu	TAA
                   t      ACCA ccttttggac
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G + T          T G
                    T     C T G C C     A
      T A A        G      | | | | |     A
    T       G G T G       G A C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCTCATAGAGCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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