The detailed information of tRNA gene sequence


Sequence ID>WENV170780637
Genome IDMAAB01010298
Search identical group
Phylum/Class[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
Species
Start position on genome 47
End posion on genome 136
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
catcaatttc
tRNA gene sequence 
GGAGAGTTGGCTGAGTGGTCGAAAGCGCCTCCCTGCTAAGGAGGTAACTGGGCAACTGGT
TCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
atttttatga
Secondary structure (Cloverleaf model)
>WENV170780637	Ser	GCT
                   c      GCCA atttttatga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAACTGGGCAACTGGTTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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