The detailed information of tRNA gene sequence


Sequence ID>WENV170780975
Genome IDMAAB01028906
Search identical group
Phylum/Class[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
Species
Start position on genome 4712
End posion on genome 4623
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagtaaaat
tRNA gene sequence 
GGTGAGCTGGCTGAGTGGCTGAAGGCGCACGCCTGGAAAGTGTGTTTAGGTTTATCCCTA
ACGAGAGTTCGAATCTCTCGCTCACCGCCA
Downstream region at tRNA end position 
tattctgtaa
Secondary structure (Cloverleaf model)
>WENV170780975	Ser	GGA
                   t      GCCA tattctgtaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G A G     C
    G         + | |                 T T
    C       A G G C
      T G A        G     TTTAGGTTTATCCCTAAC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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