The detailed information of tRNA gene sequence


Sequence ID>CA_fS100001
Genome IDAE017199
Search identical group
Phylum/ClassNanoarchaeota
SpeciesNanoarchaeum equitans Kin4-M [AE017199]
Start position on genome 221794
End posion on genome 409281
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
nnnnnnnnnG
tRNA gene sequence 
GCCCCCGTAGCTTAGTGGCAGAGCGCCGGGCTGTGGACCCGGAGGTCCCGGGTTCGAATC
CCGGCGGGGGCCnnn
Downstream region at tRNA end position 
nnnnnnn
Secondary structure (Cloverleaf model)
>CA_fS100001	His	GTG
                   G      Cnnn nnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     G
      T     T T C G       C C G G G     C
      G     + | | |                 T T
      G     G A G C
        C A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G *
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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