The detailed information of tRNA gene sequence


Sequence ID>WENV170781274
Genome IDMAAB01030508
Search identical group
Phylum/Class[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
Species
Start position on genome 3860
End posion on genome 3936
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aatccgttgc
tRNA gene sequence 
AGGGGTGTAGTTCCAATTGGTAGAACAGCGGTCTCCAAAACCGATGGTTGGGAGTTCGAG
TCTCTCCACCCCTGCCA
Downstream region at tRNA end position 
ttttcttttc
Secondary structure (Cloverleaf model)
>WENV170781274	Trp	CCA
                   c      GCCA ttttcttttc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C T C     A
      A A C        A      | + | | |     G
    T       C T T G       G G G A G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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