The detailed information of tRNA gene sequence


Sequence ID>WENV170781331
Genome IDMAAB01032306
Search identical group
Phylum/Class[MAAB] seawater metagenome; sample BD02T18 sea water enriched with oil for 18 days
Species
Start position on genome 15803
End posion on genome 15712
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcttgtgact
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATGGGCTTTAACTCC
CATCGAGGGTTCGAATCCCTCCTTCTCCGCCA
Downstream region at tRNA end position 
ctccttacta
Secondary structure (Cloverleaf model)
>WENV170781331	Ser	GCT
                   t      GCCA ctccttacta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATGGGCTTTAACTCCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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