The detailed information of tRNA gene sequence


Sequence ID>WENV170781968
Genome IDMAAC01005924
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 236191
End posion on genome 236280
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcatattttt
tRNA gene sequence 
GGAGAGGTGTCTGAGTCCGGCTTAAAGATCTAGTCTTGAAAACTAGCGGTGTAGCAATGC
ATCCCAGGGTTCGAATCCCTGTCTCTCCACtt
Downstream region at tRNA end position 
taacaaaggg
Secondary structure (Cloverleaf model)
>WENV170781968	Ser	TGA
                   t      ACtt taacaaaggg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
    C T G A        G      | | | | |     G
  C         G T C T       C A G G G     C
  G           | | |                 T T
  G         A A G A
    C T T A        T     CGGTGTAGCAATGCATCC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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