The detailed information of tRNA gene sequence


Sequence ID>WENV170782207
Genome IDMAAC01009564
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 171409
End posion on genome 171498
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tagtaaatat
tRNA gene sequence 
GGAGACATGCCCGAGTGGCCGAAGGGAGCACCTTGCTAAGGTGTCGAACGGTTTACCGTT
CCGAGAGTTCGAATCTCTCTGTCTCCGCCA
Downstream region at tRNA end position 
ttaaaaagcc
Secondary structure (Cloverleaf model)
>WENV170782207	Ser	GCT
                   t      GCCA ttaaaaagcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C C       G A G A G     C
    G         | | |                 T T
    C       A G G G
      C G A        A     CGAACGGTTTACCGTTCC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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