The detailed information of tRNA gene sequence


Sequence ID>WENV170782209
Genome IDMAAC01009564
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 176673
End posion on genome 176760
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaataattgc
tRNA gene sequence 
GGAGAATTGGCCGAGTGGTCTATGGCGCACGCTTGGAAGGCGTGAGTACAGCAATGTACC
GAGAGTTCGAATCTCTTGTTCTCCGCCA
Downstream region at tRNA end position 
ttttctaaat
Secondary structure (Cloverleaf model)
>WENV170782209	Ser	GGA
                   c      GCCA ttttctaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T + G          T A
                    T     T T C T C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G A G     C
    G       + | | |                 T T
    T       T G G C
      C T A        G     AGTACAGCAATGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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