The detailed information of tRNA gene sequence


Sequence ID>WENV170782372
Genome IDMAAC01009734
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 847439
End posion on genome 847350
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acacggcgac
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCGCCCCTGCTAAGGGTGTATGCGTGAAAGCGTA
TCGAGGGTTCGAATCCCTTCCTCTCCGCCA
Downstream region at tRNA end position 
gtccccctga
Secondary structure (Cloverleaf model)
>WENV170782372	Ser	GCT
                   c      GCCA gtccccctga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATGCGTGAAAGCGTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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