The detailed information of tRNA gene sequence


Sequence ID>WENV170782430
Genome IDMAAC01009874
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 3301
End posion on genome 3214
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaagcattac
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCCGAAGGAGCACGCCTGGAAAGTGTGTAAGTCGTAAGGCTTC
GAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
taaaaaacaa
Secondary structure (Cloverleaf model)
>WENV170782430	Ser	GGA
                   c      GCCA taaaaaacaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TAAGTCGTAAGGCTTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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