The detailed information of tRNA gene sequence


Sequence ID>WENV170782558
Genome IDMAAC01010315
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 5643
End posion on genome 5556
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctccatcttc
tRNA gene sequence 
GGAGGGGTGGCTGAGTGGCCGAAAGCACTGGTCTTGAAAACCAGCGAGTCGAGAGGCTCC
CAGGGTTCGAATCCCTGCCCCTCCGCCA
Downstream region at tRNA end position 
ttagctgtaa
Secondary structure (Cloverleaf model)
>WENV170782558	Ser	TGA
                   c      GCCA ttagctgtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        A     CGAGTCGAGAGGCTCC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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