The detailed information of tRNA gene sequence


Sequence ID>WENV170782596
Genome IDMAAC01010528
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 402
End posion on genome 313
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgcctcttga
tRNA gene sequence 
GGTGAGGTGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGTGTATAGGGGAGACTCTA
TCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tttgcaaatg
Secondary structure (Cloverleaf model)
>WENV170782596	Ser	GCT
                   a      GCCA tttgcaaatg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGGGAGACTCTATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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