The detailed information of tRNA gene sequence


Sequence ID>WENV170783729
Genome IDMAAC01018442
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 32235
End posion on genome 32324
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
accgcgcaat
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGAGACCGTC
TCCAGGGTTCGAATCCCTGTCTGTCCGCCA
Downstream region at tRNA end position 
ccttacaatt
Secondary structure (Cloverleaf model)
>WENV170783729	Ser	GGA
                   t      GCCA ccttacaatt
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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