The detailed information of tRNA gene sequence


Sequence ID>WENV170783800
Genome IDMAAC01018897
Search identical group
Phylum/Class[MAAC] seawater metagenome; sample BD02T64 sea water enriched with oil for 64 days
Species
Start position on genome 22240
End posion on genome 22329
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tacagtttct
tRNA gene sequence 
GGTGAGGTGGCCGAGTGGCCGAAGGCGCTCCCCTGCTAAGGGAGTATACCTTGATCGGTA
TCGAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
taagtaaaaa
Secondary structure (Cloverleaf model)
>WENV170783800	Ser	GCT
                   t      GCCA taagtaaaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      C G A        G     TATACCTTGATCGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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