The detailed information of tRNA gene sequence


Sequence ID>WENV170784464
Genome IDMCND01000227
Search identical group
Phylum/Class[MCND] bioreactor metagenome; activated sludge enriched with benzalkonium chloride
Species
Start position on genome 22354
End posion on genome 22441
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacgcgatct
tRNA gene sequence 
GGAGGTGTGGCCGAGTGGTTTAAGGCAGCGGTCTTGAAAACCGCCGACTGTAACAGGTCC
TAGAGTTCGAATCTCTACGCCTCCGCCA
Downstream region at tRNA end position 
aatctctacg
Secondary structure (Cloverleaf model)
>WENV170784464	Ser	TGA
                   t      GCCA aatctctacg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     A T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       T A G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGACTGTAACAGGTCC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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