The detailed information of tRNA gene sequence


Sequence ID>WENV170799913
Genome IDMDSV01221292
Search identical group
Phylum/Class[MDSV] marine metagenome; seawater
Species
Start position on genome 1663
End posion on genome 1573
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cggatattca
tRNA gene sequence 
GGAGAGGTGGCAGAGCTTGGTTTATTGTGACGGTCTCGAAAACCGTTGTACCCTAAAGGT
ACCGTGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttcagtct
Secondary structure (Cloverleaf model)
>WENV170799913	Ser	CGA
                   a      GCCA ttttcagtct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
    T C G A        G      |   | | |     G
  T         G A C G       G T G G G     C
  G         + | | +                 T T
  G         T T G T
    T T T A        G     TGTACCCTAAAGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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