The detailed information of tRNA gene sequence


Sequence ID>WENV170812734
Genome IDMDSW01188439
Search identical group
Phylum/Class[MDSW] marine metagenome; seawater
Species
Start position on genome 12046
End posion on genome 11957
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaaaaatta
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTTTAAGGCGCAGGCTTGGAAAGCTTGTATACTGTTAAAGGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
ttaatttttt
Secondary structure (Cloverleaf model)
>WENV170812734	Ser	GGA
                   a      GCCA ttaatttttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        G     TATACTGTTAAAGGTATC
                    C - G
                    A - T
                    G + T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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